IL_6T83_222
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UGAG*CAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_222 not in the Motif Atlas
- Homologous match to IL_4V88_471
- Geometric discrepancy: 0.1759
- The information below is about IL_4V88_471
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
6T83|1|2b|U|1669
6T83|1|2b|G|1670
6T83|1|2b|A|1671
6T83|1|2b|G|1672
*
6T83|1|2b|C|1729
6T83|1|2b|A|1730
6T83|1|2b|A|1731
6T83|1|2b|A|1732
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain 1b
- Large subunit ribosomal RNA; LSU rRNA
- Chain Gb
- 40S ribosomal protein S6-A
- Chain Ib
- 40S ribosomal protein S8-A
- Chain Wy
- 60S ribosomal protein L24-A
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