IL_6T83_226

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UAG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_226 not in the Motif Atlas

Homologous match to IL_4V88_476

Geometric discrepancy: 0.5163

The information below is about IL_4V88_476

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_30342.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

10

Unit IDs

6T83|1|2b|U|1688
6T83|1|2b|A|1689
6T83|1|2b|G|1690
*
6T83|1|2b|C|1711
6T83|1|2b|A|1712
6T83|1|2b|G|1713

Current chains

Chain 2b

18S rRNA

Nearby chains

Chain Gb

40S ribosomal protein S6-A

Chain Wy

60S ribosomal protein L24-A