IL_6T83_298
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GGUU*AC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_298 not in the Motif Atlas
- Geometric match to IL_7A0S_046
- Geometric discrepancy: 0.1745
- The information below is about IL_7A0S_046
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_50694.7
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 27
Unit IDs
6T83|1|Aa|G|1492
6T83|1|Aa|G|1493
6T83|1|Aa|U|1494
6T83|1|Aa|U|1495
*
6T83|1|Aa|A|1835
6T83|1|Aa|C|1836
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein L25
- Chain R
- 60S ribosomal protein L34-A
- Chain U
- 60S ribosomal protein L37-A
- Chain W
- 60S ribosomal protein L39
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