IL_6T83_323
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UCAAAGU*AACCAAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_323 not in the Motif Atlas
- Homologous match to IL_5TBW_088
- Geometric discrepancy: 0.1659
- The information below is about IL_5TBW_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_36973.8
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
6T83|1|Aa|U|2211
6T83|1|Aa|C|2212
6T83|1|Aa|A|2213
6T83|1|Aa|A|2214
6T83|1|Aa|A|2215
6T83|1|Aa|G|2216
6T83|1|Aa|U|2217
*
6T83|1|Aa|A|2228
6T83|1|Aa|A|2229
6T83|1|Aa|C|2230
6T83|1|Aa|C|2231
6T83|1|Aa|A|2232
6T83|1|Aa|A|2233
6T83|1|Aa|G|2234
Current chains
- Chain Aa
- 25S rRNA
Nearby chains
- Chain T
- 60S ribosomal protein L36-A
- Chain Z
- 60S ribosomal protein L42-A
Coloring options: