IL_6T83_377
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- AGUG*CAU
- Length
- 7 nucleotides
- Bulged bases
- 6T83|1|Bb|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_377 not in the Motif Atlas
- Homologous match to IL_5TBW_378
- Geometric discrepancy: 0.1215
- The information below is about IL_5TBW_378
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
6T83|1|Bb|A|84
6T83|1|Bb|G|85
6T83|1|Bb|U|86
6T83|1|Bb|G|87
*
6T83|1|Bb|C|94
6T83|1|Bb|A|95
6T83|1|Bb|U|96
Current chains
- Chain Bb
- 5S rRNA
Nearby chains
- Chain Aa
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 60S ribosomal protein L20-A
- Chain Ia
- 60S ribosomal protein L7-A
- Chain La
- 60S ribosomal protein L10
Coloring options: