IL_6T83_407
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAUA*UAAUU
- Length
- 9 nucleotides
- Bulged bases
- 6T83|1|a|A|506
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_407 not in the Motif Atlas
- Geometric match to IL_2O3Y_003
- Geometric discrepancy: 0.3314
- The information below is about IL_2O3Y_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
6T83|1|a|G|480
6T83|1|a|A|481
6T83|1|a|U|482
6T83|1|a|A|483
*
6T83|1|a|U|504
6T83|1|a|A|505
6T83|1|a|A|506
6T83|1|a|U|507
6T83|1|a|U|508
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain 5
- 40S ribosomal protein S30-A
- Chain k
- 40S ribosomal protein S9-A
Coloring options: