IL_6T83_458
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_458 not in the Motif Atlas
- Homologous match to IL_8CRE_469
- Geometric discrepancy: 0.2248
- The information below is about IL_8CRE_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_11399.2
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6T83|1|a|C|1644
6T83|1|a|G|1645
6T83|1|a|C|1646
6T83|1|a|U|1647
*
6T83|1|a|A|1753
6T83|1|a|A|1754
6T83|1|a|A|1755
6T83|1|a|A|1756
6T83|1|a|G|1757
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain 5
- 40S ribosomal protein S30-A
- Chain Aa
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y
- 60S ribosomal protein L41-A
- Chain y
- 40S ribosomal protein S23-A
Coloring options: