Motif IL_26271.1 Version IL_26271.1 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9SUM_219 | 9SUM | 0.3954 | 0 | CA | SSU rRNA | A | 1728 | A | 1729 | A | 1730 | A | 1731 | G | 1732 | * | C | 1619 | G | 1620 | C | 1621 | U | 1622 | cWW | cWWa | cWW | |
| 2 | IL_8CRE_469 | 8CRE | 0.0000 | 0 | CM | SSU rRNA | A | 1740 | A | 1741 | A | 1742 | A | 1743 | G | 1744 | * | C | 1631 | G | 1632 | C | 1633 | U | 1634 | cWW | ncWWa | cWW | |
| 3 | IL_2O3Y_002 | 2O3Y | 0.4222 | 0 | Decoding loop related | B+A | RNA (23-mer) | A | 38 | A | 39 | A | 40 | A | 41 | G | 42 | * | C | 7 | G | 8 | C | 9 | U | 10 | cWW | cWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAAG*CGCU | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAA*GC | 3 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Decoding loop related (1)
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Heat map statistics
- Min 0.40 | Avg 0.32 | Max 0.64
Coloring options: