IL_6T83_465
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUCA*UUUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_465 not in the Motif Atlas
- Homologous match to IL_4V88_473
- Geometric discrepancy: 0.1479
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6T83|1|a|C|1675
6T83|1|a|U|1676
6T83|1|a|C|1677
6T83|1|a|A|1678
*
6T83|1|a|U|1723
6T83|1|a|U|1724
6T83|1|a|U|1725
6T83|1|a|G|1726
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain Aa
- Large subunit ribosomal RNA; LSU rRNA
- Chain H
- 60S ribosomal protein L24-A
- Chain h
- 40S ribosomal protein S6-A
- Chain j
- 40S ribosomal protein S8-A
Coloring options: