IL_6T83_506
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAAAAAAUU*AUAUUAGC
- Length
- 17 nucleotides
- Bulged bases
- 6T83|1|a|U|794, 6T83|1|a|U|795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_506 not in the Motif Atlas
- Homologous match to IL_8P9A_414
- Geometric discrepancy: 0.4268
- The information below is about IL_8P9A_414
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6T83|1|a|G|751
6T83|1|a|A|752
6T83|1|a|A|753
6T83|1|a|A|754
6T83|1|a|A|755
6T83|1|a|A|756
6T83|1|a|A|757
6T83|1|a|U|758
6T83|1|a|U|759
*
6T83|1|a|A|791
6T83|1|a|U|792
6T83|1|a|A|793
6T83|1|a|U|794
6T83|1|a|U|795
6T83|1|a|A|796
6T83|1|a|G|797
6T83|1|a|C|798
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain f
- 40S ribosomal protein S4-A
- Chain k
- 40S ribosomal protein S9-A
- Chain m
- 40S ribosomal protein S11-A
- Chain x
- 40S ribosomal protein S22-A
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