IL_6TBV_103
3D structure
- PDB id
- 6TBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6TBV|1|23S1|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TBV_103 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0535
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6TBV|1|23S1|C|998
6TBV|1|23S1|U|999
6TBV|1|23S1|A|1000
6TBV|1|23S1|A|1001
6TBV|1|23S1|G|1002
*
6TBV|1|23S1|C|1153
6TBV|1|23S1|G|1154
6TBV|1|23S1|A|1155
6TBV|1|23S1|A|1156
6TBV|1|23S1|G|1157
Current chains
- Chain 23S1
- 23S rRNA
Nearby chains
- Chain 05S1
- 5S ribosomal RNA; 5S rRNA
- Chain L201
- 50S ribosomal protein L20
- Chain L211
- 50S ribosomal protein L21
- Chain L301
- 50S ribosomal protein L30
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