IL_6TC3_028

3D structure

PDB id

6TC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAAGG*CAUUGAC

Length

12 nucleotides

Bulged bases

6TC3|1|16S1|A|478

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TC3|1|16S1|G|450
6TC3|1|16S1|A|451
6TC3|1|16S1|A|452
6TC3|1|16S1|G|453
6TC3|1|16S1|G|454
*
6TC3|1|16S1|C|477
6TC3|1|16S1|A|478
6TC3|1|16S1|U|479
6TC3|1|16S1|U|480
6TC3|1|16S1|G|481
6TC3|1|16S1|A|482
6TC3|1|16S1|C|483

Current chains

Chain 16S1

16S rRNA

Nearby chains

Chain S161

30S ribosomal protein S16