IL_6TC3_059
3D structure
- PDB id
- 6TC3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CUGC*GAGGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TC3_059 not in the Motif Atlas
- Homologous match to IL_5J7L_053
- Geometric discrepancy: 0.1028
- The information below is about IL_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42032.1
- Basepair signature
- cWW-cSH-cWW-tWH-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6TC3|1|16S1|C|1158
6TC3|1|16S1|U|1159
6TC3|1|16S1|G|1160
6TC3|1|16S1|C|1161
*
6TC3|1|16S1|G|1175
6TC3|1|16S1|A|1176
6TC3|1|16S1|G|1177
6TC3|1|16S1|G|1178
6TC3|1|16S1|A|1179
6TC3|1|16S1|A|1180
6TC3|1|16S1|G|1181
Current chains
- Chain 16S1
- 16S rRNA
Nearby chains
- Chain S021
- 30S ribosomal protein S2
- Chain S091
- 30S ribosomal protein S9
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