IL_6TC3_157

3D structure

PDB id

6TC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

6TC3|1|23S1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TC3|1|23S1|G|2123
6TC3|1|23S1|G|2124
6TC3|1|23S1|G|2125
6TC3|1|23S1|A|2126
6TC3|1|23S1|G|2127
*
6TC3|1|23S1|C|2161
6TC3|1|23S1|G|2162
6TC3|1|23S1|A|2163
6TC3|1|23S1|C|2164
6TC3|1|23S1|C|2165
6TC3|1|23S1|U|2166
6TC3|1|23S1|U|2167
6TC3|1|23S1|G|2168
6TC3|1|23S1|A|2169
6TC3|1|23S1|A|2170
6TC3|1|23S1|A|2171
6TC3|1|23S1|U|2172
6TC3|1|23S1|A|2173
6TC3|1|23S1|C|2174
6TC3|1|23S1|C|2175

Current chains

Chain 23S1

23S rRNA

Nearby chains