IL_6TH6_076

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CCC*GAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6TH6_076 not in the Motif Atlas

Geometric match to IL_4KZD_003

Geometric discrepancy: 0.2083

The information below is about IL_4KZD_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

6TH6|1|BA|C|320
6TH6|1|BA|C|321
6TH6|1|BA|C|322
*
6TH6|1|BA|G|393
6TH6|1|BA|A|394
6TH6|1|BA|G|395

Current chains

Chain BA

23S ribosomal RNA

Nearby chains