IL_6TH6_107
3D structure
- PDB id
- 6TH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- UUAA(OMG)G*CCGAGA
- Length
- 12 nucleotides
- Bulged bases
- 6TH6|1|BA|G|1288
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TH6_107 not in the Motif Atlas
- Geometric match to IL_9AXU_113
- Geometric discrepancy: 0.2048
- The information below is about IL_9AXU_113
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74322.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6TH6|1|BA|U|1125
6TH6|1|BA|U|1126
6TH6|1|BA|A|1127
6TH6|1|BA|A|1128
6TH6|1|BA|OMG|1129
6TH6|1|BA|G|1130
*
6TH6|1|BA|C|1284
6TH6|1|BA|C|1285
6TH6|1|BA|G|1286
6TH6|1|BA|A|1287
6TH6|1|BA|G|1288
6TH6|1|BA|A|1289
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain Ba
- 50S ribosomal protein L30
- Chain Bd
- 50S ribosomal protein L32e
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