IL_6TNN_025
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6TNN|1|U|G|821, 6TNN|1|U|A|833, 6TNN|1|U|A|834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNN_025 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.0765
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6TNN|1|U|G|820
6TNN|1|U|G|821
6TNN|1|U|G|822
*
6TNN|1|U|C|832
6TNN|1|U|A|833
6TNN|1|U|A|834
6TNN|1|U|U|835
6TNN|1|U|C|836
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain W
- 50S ribosomal protein L2
- Chain Y
- 50S ribosomal protein L4
- Chain l
- 50S ribosomal protein L22
- Chain r
- 50S ribosomal protein L34
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