IL_6TNN_050

3D structure

PDB id

6TNN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GGAAG*CGC

Length

8 nucleotides

Bulged bases

6TNN|1|U|G|1369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6TNN_050 not in the Motif Atlas

Homologous match to IL_7A0S_047

Geometric discrepancy: 0.2523

The information below is about IL_7A0S_047

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_06671.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

10

Unit IDs

6TNN|1|U|G|1356
6TNN|1|U|G|1357
6TNN|1|U|A|1358
6TNN|1|U|A|1359
6TNN|1|U|G|1360
*
6TNN|1|U|C|1368
6TNN|1|U|G|1369
6TNN|1|U|C|1370

Current chains

Chain U

pre-23S rRNA

Nearby chains

Chain l

50S ribosomal protein L22