IL_6TNN_104
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CCGCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNN_104 not in the Motif Atlas
- Homologous match to IL_7A0S_095
- Geometric discrepancy: 0.1492
- The information below is about IL_7A0S_095
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
6TNN|1|U|C|2707
6TNN|1|U|C|2708
6TNN|1|U|G|2709
6TNN|1|U|C|2710
6TNN|1|U|U|2711
*
6TNN|1|U|A|2752
6TNN|1|U|U|2753
6TNN|1|U|G|2754
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain X
- 50S ribosomal protein L3
- Chain d
- 50S ribosomal protein L14
- Chain i
- 50S ribosomal protein L19
Coloring options: