IL_6TNN_105
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6TNN|1|U|U|2716, 6TNN|1|U|A|2717
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TNN_105 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.0893
- The information below is about IL_4WF9_102
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_82016.1
- Basepair signature
- cWW-L-tHS-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
6TNN|1|U|U|2714
6TNN|1|U|G|2715
6TNN|1|U|U|2716
6TNN|1|U|A|2717
6TNN|1|U|C|2718
*
6TNN|1|U|G|2745
6TNN|1|U|G|2746
6TNN|1|U|U|2747
6TNN|1|U|A|2748
6TNN|1|U|G|2749
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain X
- 50S ribosomal protein L3
- Chain g
- 50S ribosomal protein L17
- Chain i
- 50S ribosomal protein L19
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