IL_6U48_056

3D structure

PDB id

6U48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S with phazolicin (PHZ) bound in exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

CUG*CAAGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6U48_056 not in the Motif Atlas

Homologous match to IL_4WF9_060

Geometric discrepancy: 0.5693

The information below is about IL_4WF9_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6U48|1|CA|C|1480
6U48|1|CA|U|1481
6U48|1|CA|G|1482
*
6U48|1|CA|C|1507
6U48|1|CA|A|1508
6U48|1|CA|A|1509
6U48|1|CA|G|1510
6U48|1|CA|G|1511

Current chains

Chain CA

23S rRNA

Nearby chains