IL_6U48_115

3D structure

PDB id

6U48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S with phazolicin (PHZ) bound in exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

GUUAG*CAAAAAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6U48|1|CA|G|291
6U48|1|CA|U|292
6U48|1|CA|U|293
6U48|1|CA|A|294
6U48|1|CA|G|295
*
6U48|1|CA|C|343
6U48|1|CA|A|344
6U48|1|CA|A|345
6U48|1|CA|A|346
6U48|1|CA|A|347
6U48|1|CA|A|348
6U48|1|CA|U|349

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CV

50S ribosomal protein uL24