IL_6UCQ_298

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAAACC*GACUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_298 not in the Motif Atlas

Geometric match to IL_4LFB_019

Geometric discrepancy: 0.1139

The information below is about IL_4LFB_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31561.1

Basepair signature

cWW-L-R-tWH-tWH-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6UCQ|1|2a|G|450
6UCQ|1|2a|A|451
6UCQ|1|2a|A|452
6UCQ|1|2a|A|453
6UCQ|1|2a|C|454
6UCQ|1|2a|C|455
*
6UCQ|1|2a|G|476
6UCQ|1|2a|A|477
6UCQ|1|2a|C|479
6UCQ|1|2a|U|480
6UCQ|1|2a|G|481
6UCQ|1|2a|A|482
6UCQ|1|2a|C|483

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2p

30S ribosomal protein S16