IL_6UCQ_354

3D structure

PDB id

6UCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome recycling complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGCUGAC*GGUGGAG

Length

14 nucleotides

Bulged bases

6UCQ|1|2A|G|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UCQ_354 not in the Motif Atlas

Homologous match to IL_9DFE_024

Geometric discrepancy: 0.1165

The information below is about IL_9DFE_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68243.1

Basepair signature

cWW-L-cWW-cWW-R-L-tHS-cWW

Number of instances in this motif group

1

Unit IDs

6UCQ|1|2A|C|844
6UCQ|1|2A|G|845
6UCQ|1|2A|C|846
6UCQ|1|2A|U|847
6UCQ|1|2A|G|848
6UCQ|1|2A|A|849
6UCQ|1|2A|C|850
*
6UCQ|1|2A|G|927
6UCQ|1|2A|G|928
6UCQ|1|2A|U|930
6UCQ|1|2A|G|931
6UCQ|1|2A|G|932
6UCQ|1|2A|A|933
6UCQ|1|2A|G|934

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 1P

50S ribosomal protein L15

Chain 23

50S ribosomal protein L30