IL_6UCQ_377
3D structure
- PDB id
- 6UCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome recycling complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CGAAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 6UCQ|1|1A|A|1045, 6UCQ|1|1A|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UCQ_377 not in the Motif Atlas
- Homologous match to IL_9DFE_041
- Geometric discrepancy: 0.3014
- The information below is about IL_9DFE_041
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.3
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6UCQ|1|1A|C|1043
6UCQ|1|1A|G|1044
6UCQ|1|1A|A|1045
6UCQ|1|1A|A|1046
6UCQ|1|1A|G|1047
6UCQ|1|1A|A|1048
6UCQ|1|1A|C|1049
6UCQ|1|1A|A|1050
6UCQ|1|1A|G|1051
*
6UCQ|1|1A|U|1108
6UCQ|1|1A|C|1109
6UCQ|1|1A|G|1110
6UCQ|1|1A|A|1111
6UCQ|1|1A|G|1112
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1H
- 50S ribosomal protein L6
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