IL_6UZ7_065

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_065 not in the Motif Atlas

Homologous match to IL_4V88_461

Geometric discrepancy: 0.1993

The information below is about IL_4V88_461

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

6UZ7|1|2|C|1493
6UZ7|1|2|U|1494
6UZ7|1|2|U|1495
6UZ7|1|2|G|1496
*
6UZ7|1|2|C|1507
6UZ7|1|2|U|1508
6UZ7|1|2|G|1509
6UZ7|1|2|G|1510

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain T

KLLA0A07194p