IL_6UZ7_076
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGGAUU*AAGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_076 not in the Motif Atlas
- Geometric match to IL_3FTF_001
- Geometric discrepancy: 0.3982
- The information below is about IL_3FTF_001
- Detailed Annotation
- Quadruple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_29495.2
- Basepair signature
- cWW-tSH-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|2|A|1676
6UZ7|1|2|G|1677
6UZ7|1|2|G|1678
6UZ7|1|2|A|1679
6UZ7|1|2|U|1680
6UZ7|1|2|U|1681
*
6UZ7|1|2|A|1716
6UZ7|1|2|A|1717
6UZ7|1|2|G|1718
6UZ7|1|2|A|1719
6UZ7|1|2|A|1720
6UZ7|1|2|U|1721
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain AW
- 60S ribosomal protein L24
- Chain G
- 40S ribosomal protein S6
- Chain I
- 40S ribosomal protein S8
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