IL_6UZ7_097

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_097 not in the Motif Atlas

Geometric match to IL_4E48_003

Geometric discrepancy: 0.1476

The information below is about IL_4E48_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

6UZ7|1|5|C|497
6UZ7|1|5|U|498
6UZ7|1|5|C|499
*
6UZ7|1|5|G|537
6UZ7|1|5|U|538
6UZ7|1|5|G|539

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AC

KLLA0B07139p

Chain AM

KLLA0B13409p

Chain AS

60S ribosomal protein L20