IL_6UZ7_101

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AGGG*UGCAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_101 not in the Motif Atlas

Homologous match to IL_5TBW_023

Geometric discrepancy: 0.1096

The information below is about IL_5TBW_023

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_07235.3

Basepair signature

cWW-tSH-L-tHS-cWW

Number of instances in this motif group

8

Unit IDs

6UZ7|1|5|A|698
6UZ7|1|5|G|699
6UZ7|1|5|G|700
6UZ7|1|5|G|701
*
6UZ7|1|5|U|712
6UZ7|1|5|G|713
6UZ7|1|5|C|714
6UZ7|1|5|A|715
6UZ7|1|5|U|716

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AQ

KLLA0A07227p

Chain Bb

60S ribosomal protein L29