IL_6UZ7_119
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCGAAU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 6UZ7|1|5|G|972
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_119 not in the Motif Atlas
- Homologous match to IL_5TBW_040
- Geometric discrepancy: 0.1239
- The information below is about IL_5TBW_040
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
6UZ7|1|5|G|970
6UZ7|1|5|C|971
6UZ7|1|5|G|972
6UZ7|1|5|A|973
6UZ7|1|5|A|974
6UZ7|1|5|U|975
*
6UZ7|1|5|A|1017
6UZ7|1|5|A|1018
6UZ7|1|5|A|1019
6UZ7|1|5|C|1020
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain AD
- KLLA0D06941p
- Chain AI
- KLLA0D05643p
- Chain AT
- KLLA0E23651p
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