IL_6UZ7_128
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGCCGGAA*UA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_128 not in the Motif Atlas
- Homologous match to IL_5TBW_049
- Geometric discrepancy: 0.1212
- The information below is about IL_5TBW_049
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|U|1144
6UZ7|1|5|G|1145
6UZ7|1|5|C|1146
6UZ7|1|5|C|1147
6UZ7|1|5|G|1148
6UZ7|1|5|G|1149
6UZ7|1|5|A|1150
6UZ7|1|5|A|1151
*
6UZ7|1|5|U|1296
6UZ7|1|5|A|1297
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AF
- KLLA0D03410p
- Chain AO
- KLLA0F04675p
- Chain Bf
- KLLA0D07405p
Coloring options: