IL_6UZ7_137
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGACGAAG*UAGAA
- Length
- 13 nucleotides
- Bulged bases
- 6UZ7|1|5|C|1362
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_137 not in the Motif Atlas
- Homologous match to IL_8C3A_063
- Geometric discrepancy: 0.1244
- The information below is about IL_8C3A_063
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
6UZ7|1|5|U|1359
6UZ7|1|5|G|1360
6UZ7|1|5|A|1361
6UZ7|1|5|C|1362
6UZ7|1|5|G|1363
6UZ7|1|5|A|1364
6UZ7|1|5|A|1365
6UZ7|1|5|G|1366
*
6UZ7|1|5|U|1386
6UZ7|1|5|A|1387
6UZ7|1|5|G|1388
6UZ7|1|5|A|1389
6UZ7|1|5|A|1390
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AC
- KLLA0B07139p
- Chain AY
- KLLA0B05742p
- Chain Be
- KLLA0E06843p
Coloring options: