IL_6UZ7_150

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUAAC*GGAAGA

Length

11 nucleotides

Bulged bases

6UZ7|1|5|G|1720

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_150 not in the Motif Atlas

Homologous match to IL_8C3A_077

Geometric discrepancy: 0.1278

The information below is about IL_8C3A_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69313.1

Basepair signature

cWW-tWH-tHH-tHS-cWW

Number of instances in this motif group

2

Unit IDs

6UZ7|1|5|U|1663
6UZ7|1|5|U|1664
6UZ7|1|5|A|1665
6UZ7|1|5|A|1666
6UZ7|1|5|C|1667
*
6UZ7|1|5|G|1716
6UZ7|1|5|G|1717
6UZ7|1|5|A|1718
6UZ7|1|5|A|1719
6UZ7|1|5|G|1720
6UZ7|1|5|A|1721

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain Bg

KLLA0C08371p

Chain Bk

KLLA0C18216p