IL_6UZ7_163
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAUGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 6UZ7|1|5|U|2128, 6UZ7|1|5|U|2144, 6UZ7|1|5|C|2148
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_163 not in the Motif Atlas
- Homologous match to IL_5TBW_083
- Geometric discrepancy: 0.0995
- The information below is about IL_5TBW_083
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_64509.1
- Basepair signature
- cWW-tWW-tWW-tSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|C|2125
6UZ7|1|5|G|2126
6UZ7|1|5|A|2127
6UZ7|1|5|U|2128
6UZ7|1|5|G|2129
6UZ7|1|5|G|2130
*
6UZ7|1|5|U|2142
6UZ7|1|5|G|2143
6UZ7|1|5|U|2144
6UZ7|1|5|U|2145
6UZ7|1|5|G|2146
6UZ7|1|5|A|2147
6UZ7|1|5|C|2148
6UZ7|1|5|G|2149
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain AA
- KLLA0D16027p
- Chain Bp
- KLLA0E05941p
Coloring options: