IL_6UZ7_165

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UG*UAAA

Length

6 nucleotides

Bulged bases

6UZ7|1|5|A|2211, 6UZ7|1|5|A|2212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_165 not in the Motif Atlas

Homologous match to IL_8C3A_090

Geometric discrepancy: 0.1464

The information below is about IL_8C3A_090

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

6UZ7|1|5|U|2169
6UZ7|1|5|G|2170
*
6UZ7|1|5|U|2210
6UZ7|1|5|A|2211
6UZ7|1|5|A|2212
6UZ7|1|5|A|2213

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain 2

Small subunit ribosomal RNA; SSU rRNA

Chain AA

KLLA0D16027p