IL_6UZ7_169
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CCAAAUGCCUCG*CGCG
- Length
- 16 nucleotides
- Bulged bases
- 6UZ7|1|5|A|2250, 6UZ7|1|5|C|2256, 6UZ7|1|5|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_169 not in the Motif Atlas
- Geometric match to IL_5TBW_090
- Geometric discrepancy: 0.1484
- The information below is about IL_5TBW_090
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_66080.1
- Basepair signature
- cWW-cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6UZ7|1|5|C|2246
6UZ7|1|5|C|2247
6UZ7|1|5|A|2248
6UZ7|1|5|A|2249
6UZ7|1|5|A|2250
6UZ7|1|5|U|2251
6UZ7|1|5|G|2252
6UZ7|1|5|C|2253
6UZ7|1|5|C|2254
6UZ7|1|5|U|2255
6UZ7|1|5|C|2256
6UZ7|1|5|G|2257
*
6UZ7|1|5|C|2273
6UZ7|1|5|G|2274
6UZ7|1|5|C|2275
6UZ7|1|5|G|2276
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 1
- KLLA0F23265p
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain Bn
- 60S ribosomal protein L41
Coloring options: