IL_6UZ7_177
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AUUAAGC*GGGU
- Length
- 11 nucleotides
- Bulged bases
- 6UZ7|1|5|U|2491, 6UZ7|1|5|G|2553, 6UZ7|1|5|G|2554
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_177 not in the Motif Atlas
- Homologous match to IL_5TBW_096
- Geometric discrepancy: 0.2315
- The information below is about IL_5TBW_096
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74114.1
- Basepair signature
- cWW-cWS-cWW-L-R
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|A|2489
6UZ7|1|5|U|2490
6UZ7|1|5|U|2491
6UZ7|1|5|A|2492
6UZ7|1|5|A|2493
6UZ7|1|5|G|2494
6UZ7|1|5|C|2495
*
6UZ7|1|5|G|2552
6UZ7|1|5|G|2553
6UZ7|1|5|G|2554
6UZ7|1|5|U|2555
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AA
- KLLA0D16027p
- Chain AG
- KLLA0E00573p
- Chain AX
- 60S ribosomal protein L25
Coloring options: