IL_6UZ7_188

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUC*GUGAG

Length

8 nucleotides

Bulged bases

6UZ7|1|5|G|2913, 6UZ7|1|5|A|2914

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_188 not in the Motif Atlas

Homologous match to IL_8C3A_116

Geometric discrepancy: 0.1227

The information below is about IL_8C3A_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

6UZ7|1|5|C|2847
6UZ7|1|5|U|2848
6UZ7|1|5|C|2849
*
6UZ7|1|5|G|2911
6UZ7|1|5|U|2912
6UZ7|1|5|G|2913
6UZ7|1|5|A|2914
6UZ7|1|5|G|2915

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AV

KLLA0E06997p