IL_6UZ7_194

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAU*AGAACG

Length

10 nucleotides

Bulged bases

6UZ7|1|5|A|3110, 6UZ7|1|5|C|3111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_194 not in the Motif Atlas

Homologous match to IL_5TBW_114

Geometric discrepancy: 0.1072

The information below is about IL_5TBW_114

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.12

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

35

Unit IDs

6UZ7|1|5|C|2972
6UZ7|1|5|A|2973
6UZ7|1|5|A|2974
6UZ7|1|5|U|2975
*
6UZ7|1|5|A|3107
6UZ7|1|5|G|3108
6UZ7|1|5|A|3109
6UZ7|1|5|A|3110
6UZ7|1|5|C|3111
6UZ7|1|5|G|3112

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain AO

KLLA0F04675p