IL_6UZ7_200

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUUAU*AGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_200 not in the Motif Atlas

Homologous match to IL_8P9A_348

Geometric discrepancy: 0.1794

The information below is about IL_8P9A_348

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

25

Unit IDs

6UZ7|1|5|A|3071
6UZ7|1|5|U|3072
6UZ7|1|5|U|3073
6UZ7|1|5|A|3074
6UZ7|1|5|U|3075
*
6UZ7|1|5|A|3095
6UZ7|1|5|G|3096
6UZ7|1|5|A|3097
6UZ7|1|5|A|3098
6UZ7|1|5|U|3099

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain AH

KLLA0F04499p

Chain AO

KLLA0F04675p

Chain Bm

Ubiquitin fusion protein