IL_6UZ7_203
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAAGAAUAAG*CGCUGAA
- Length
- 17 nucleotides
- Bulged bases
- 6UZ7|1|5|A|3148, 6UZ7|1|5|A|3154, 6UZ7|1|5|C|3174, 6UZ7|1|5|U|3175, 6UZ7|1|5|A|3177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_203 not in the Motif Atlas
- Homologous match to IL_5TBW_124
- Geometric discrepancy: 0.1273
- The information below is about IL_5TBW_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15174.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-cSS-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|U|3147
6UZ7|1|5|A|3148
6UZ7|1|5|A|3149
6UZ7|1|5|G|3150
6UZ7|1|5|A|3151
6UZ7|1|5|A|3152
6UZ7|1|5|U|3153
6UZ7|1|5|A|3154
6UZ7|1|5|A|3155
6UZ7|1|5|G|3156
*
6UZ7|1|5|C|3172
6UZ7|1|5|G|3173
6UZ7|1|5|C|3174
6UZ7|1|5|U|3175
6UZ7|1|5|G|3176
6UZ7|1|5|A|3177
6UZ7|1|5|A|3178
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AE
- KLLA0B04686p
- Chain AH
- KLLA0F04499p
- Chain AM
- KLLA0B13409p
- Chain AO
- KLLA0F04675p
- Chain AS
- 60S ribosomal protein L20
- Chain Bf
- KLLA0D07405p
Coloring options: