IL_6UZ7_237
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUCU*AGCU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_237 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.212
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.3
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
6UZ7|1|5|G|641
6UZ7|1|5|U|642
6UZ7|1|5|C|643
6UZ7|1|5|U|644
*
6UZ7|1|5|A|762
6UZ7|1|5|G|763
6UZ7|1|5|C|764
6UZ7|1|5|U|765
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- Ribosomal protein L15
- Chain AQ
- KLLA0A07227p
- Chain Ba
- RPL28
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