IL_6UZ7_243
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_243 not in the Motif Atlas
- Homologous match to IL_8P9A_305
- Geometric discrepancy: 0.0929
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.2
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
6UZ7|1|5|G|1867
6UZ7|1|5|G|1868
6UZ7|1|5|A|1869
6UZ7|1|5|A|1870
6UZ7|1|5|G|1871
6UZ7|1|5|U|1872
6UZ7|1|5|C|1873
6UZ7|1|5|G|1874
6UZ7|1|5|G|1875
*
6UZ7|1|5|C|2302
6UZ7|1|5|U|2303
6UZ7|1|5|G|2304
6UZ7|1|5|U|2305
6UZ7|1|5|C|2306
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AB
- 60S ribosomal protein L3
- Chain AV
- KLLA0E06997p
Coloring options: