IL_6V39_035
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6V39|1|AN1|A|1154
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V39_035 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.119
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6V39|1|AN1|C|995
6V39|1|AN1|U|996
6V39|1|AN1|A|997
6V39|1|AN1|A|998
6V39|1|AN1|G|999
*
6V39|1|AN1|C|1151
6V39|1|AN1|G|1152
6V39|1|AN1|A|1153
6V39|1|AN1|A|1154
6V39|1|AN1|G|1155
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain P
- 50S ribosomal protein L20
- Chain Q
- 50S ribosomal protein L21
- Chain Y
- 50S ribosomal protein L30
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