IL_6V39_073
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GC*GCAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V39_073 not in the Motif Atlas
- Geometric match to IL_7A0S_071
- Geometric discrepancy: 0.0909
- The information below is about IL_7A0S_071
- Detailed Annotation
- Bulged stacked bases
- Broad Annotation
- Bulged stacked bases
- Motif group
- IL_22551.4
- Basepair signature
- cWW-L-cWW-L
- Number of instances in this motif group
- 9
Unit IDs
6V39|1|AN1|G|1929
6V39|1|AN1|C|1930
*
6V39|1|AN1|G|1960
6V39|1|AN1|C|1961
6V39|1|AN1|A|1962
6V39|1|AN1|C|1963
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain v
- Transfer RNA; tRNA
Coloring options: