IL_6V39_084
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V39_084 not in the Motif Atlas
- Geometric match to IL_4KZD_003
- Geometric discrepancy: 0.2546
- The information below is about IL_4KZD_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
6V39|1|AN1|U|2104
6V39|1|AN1|U|2105
6V39|1|AN1|G|2106
*
6V39|1|AN1|C|2175
6V39|1|AN1|U|2176
6V39|1|AN1|G|2177
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: