IL_6V39_144
3D structure
- PDB id
- 6V39 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UGG*CUAA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V39_144 not in the Motif Atlas
- Geometric match to IL_4WSM_372
- Geometric discrepancy: 0.3872
- The information below is about IL_4WSM_372
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09990.4
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6V39|1|sN1|U|656
6V39|1|sN1|G|657
6V39|1|sN1|G|658
*
6V39|1|sN1|C|741
6V39|1|sN1|U|742
6V39|1|sN1|A|743
6V39|1|sN1|A|744
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
Coloring options: