3D structure

PDB id
6V3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
2.82 Å

Loop

Sequence
CUAA*UGAUG
Length
9 nucleotides
Bulged bases
6V3A|1|AN1|U|1552
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6V3A_055 not in the Motif Atlas
Homologous match to IL_7RQB_057
Geometric discrepancy: 0.0851
The information below is about IL_7RQB_057
Detailed Annotation
tSH-tHW
Broad Annotation
No text annotation
Motif group
IL_04059.1
Basepair signature
cWW-tWH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

6V3A|1|AN1|C|1432
6V3A|1|AN1|U|1433
6V3A|1|AN1|A|1434
6V3A|1|AN1|A|1435
*
6V3A|1|AN1|U|1549
6V3A|1|AN1|G|1550
6V3A|1|AN1|A|1551
6V3A|1|AN1|U|1552
6V3A|1|AN1|G|1553

Current chains

Chain AN1
23s ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0771 s