IL_6V3A_104
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- UGUAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 6V3A|1|AN1|U|2685, 6V3A|1|AN1|A|2686
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_104 not in the Motif Atlas
- Homologous match to IL_4WF9_102
- Geometric discrepancy: 0.1029
- The information below is about IL_4WF9_102
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
6V3A|1|AN1|U|2683
6V3A|1|AN1|G|2684
6V3A|1|AN1|U|2685
6V3A|1|AN1|A|2686
6V3A|1|AN1|C|2687
*
6V3A|1|AN1|G|2714
6V3A|1|AN1|G|2715
6V3A|1|AN1|U|2716
6V3A|1|AN1|A|2717
6V3A|1|AN1|G|2718
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L17
- Chain O
- 50S ribosomal protein L19
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