IL_6V3A_172
3D structure
- PDB id
- 6V3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.82 Å
Loop
- Sequence
- GUUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 6V3A|1|sN1|U|1254, 6V3A|1|sN1|A|1277
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3A_172 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.2054
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6V3A|1|sN1|G|1252
6V3A|1|sN1|U|1253
6V3A|1|sN1|U|1254
6V3A|1|sN1|G|1255
*
6V3A|1|sN1|C|1274
6V3A|1|sN1|U|1275
6V3A|1|sN1|A|1276
6V3A|1|sN1|A|1277
6V3A|1|sN1|U|1278
6V3A|1|sN1|C|1279
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: